Thesis Topics

We are currently offering a number of topics for suitable BSc, MSc (Computer Science or Bioinformatics) students.
Furthermore, other topics might be available based on request and suitability.

Possible topics:
TopicDegree
DTW library for popular data science and machine learning frameworksB.Sc.
Identifying atmospheric fronts using the dynamic state index (DSI) on GPUsB.Sc.
Benchmarking deep learning tools on bioinformatics dataM.Sc. | angewandte Bioinformatik
Accelerating Secure Multiparty Computation using Tensor CoresB.Sc. | M.Sc.
Approximate membership query filters on GPUsB.Sc. | M.Sc.
Big Integer Arithmetic with CUDAB.Sc. | M.Sc.
Evaluating Distributed Shared Memory (DSEM) on Hopper GPUsB.Sc. | M.Sc.
Improving Polynomial Multiplication for Homomorphic Encryption on GPUsB.Sc. | M.Sc.
Parallelizing Lyndon Factorization on GPUsB.Sc. | M.Sc.
Benchmarking of Metagenomic classification toolsB.Sc. | M.Sc. | angewandte Bioinformatik
Error correction with gaps in next-generation sequencing dataB.Sc. | M.Sc. | angewandte Bioinformatik
Improving network architecture for deep learning on metagenomic classificationB.Sc. | M.Sc. | angewandte Bioinformatik
Parallel hash table based similarity search for long sequencing readsB.Sc. | M.Sc. | angewandte Bioinformatik
Fine-tuning LLMs on bioinformatics data for pattern recognitionM.Sc.
Multi-dimensional time series motif discovery on GPUsM.Sc.
Optimizing LLM inference on Grace Hopper GPU systemsM.Sc.
Weather front prediction using Transformer ModelsM.Sc.
Metagenomics with long readsM.Sc. | angewandte Bioinformatik