We are currently offering a number of topics for suitable BSc, MSc (Computer Science or Bioinformatics) students. Furthermore, other topics might be available based on request and suitability.
Possible topics:
- Suffix Tree Construction on DGX-Systems (MSc)
- Sparse Matrix Multiplication on modern multi-GPU systems (MSc)
- Denovo Genome Assembly on GPUs (MSc)
- New Imputation Method for scRNA-Seq Data (MSc Bioinformatics)
- Parallelizing tSNE for scRNA-seq Data (MSc)
- Multi-dimensional FFT on DGX-Systems (BSc)
- CUDA-accelerated SoftDTW (BSc)
- Improving Communication Primitives for Multi-GPU Systems (BSc)
- Boolean Matrix Factorization using MPI (BSc)
- Improving Error Correction Methods for Next-Generation Sequencing (MSc)
- Improving Equi-Joins on multi-GPUs (MSc)